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MafDb.TOPMed.freeze5.hg19

This is the development version of MafDb.TOPMed.freeze5.hg19; for the stable release version, see MafDb.TOPMed.freeze5.hg19.

All versions 3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7

Minor allele frequency data from TOPMed for hg19


Bioconductor version: Development (3.24)

Store minor allele frequency data from NHLBI TOPMed for the human genome version hg19.

Author: Robert Castelo [aut, cre]

Maintainer: Robert Castelo <robert.castelo at upf.edu>

Citation (from within R, enter citation("MafDb.TOPMed.freeze5.hg19")):

Robert Castelo. MafDb.TOPMed.freeze5.hg19: Minor allele frequency data from TOPMed for hg19. doi:10.18129/B9.bioc.MafDb.TOPMed.freeze5.hg19, R package version 3.10.0, https://bioconductor.org/packages/MafDb.TOPMed.freeze5.hg19.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")

BiocManager::install("MafDb.TOPMed.freeze5.hg19")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

No vignettes available
Reference ManualPDF
NEWSText

Details

biocViews AnnotationData, Genetics, GenomicScores, Homo_sapiens
Version3.10.0
In Bioconductor sinceBioC 3.7 (R-3.5) (8.5 years)
License Artistic-2.0
Depends R (>= 3.5.0), GenomicScores (>= 1.9.6)
Imports utils, S4Vectors, IRanges, GenomicRanges, GenomeInfoDb, BSgenome
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Suggests SNPlocs.Hsapiens.dbSNP144.GRCh37
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package MafDb.TOPMed.freeze5.hg19_3.10.0.tar.gz
Windows Binary (x86_64)
macOS Binary (big-sur-x86_64)
macOS Binary (sonoma-arm64)
Package Short Url https://bioconductor.org/packages/MafDb.TOPMed.freeze5.hg19/
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