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BSgenome.Vvinifera.URGI.IGGP12Xv0

This is the development version of BSgenome.Vvinifera.URGI.IGGP12Xv0; for the stable release version, see BSgenome.Vvinifera.URGI.IGGP12Xv0.

All versions 3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2

Full reference nuclear genome sequences for Vitis vinifera subsp. vinifera PN40024 (IGGP version 12Xv0)


Bioconductor version: Development (3.24)

Full reference nuclear genome sequences for Vitis vinifera subsp. vinifera PN40024 (derived from Pinot Noir and close to homozygosity after 6-9 rounds of selfing) as assembled by the IGGP (version 12Xv0) and available at the URGI (INRA)

Author: Timothee Flutre [cre,aut]

Maintainer: Timothee Flutre <timothee.flutre at supagro.inra.fr>

Citation (from within R, enter citation("BSgenome.Vvinifera.URGI.IGGP12Xv0")):

Timothee Flutre. BSgenome.Vvinifera.URGI.IGGP12Xv0: Full reference nuclear genome sequences for Vitis vinifera subsp. vinifera PN40024 (IGGP version 12Xv0). doi:10.18129/B9.bioc.BSgenome.Vvinifera.URGI.IGGP12Xv0, R package version 0.1, https://bioconductor.org/packages/BSgenome.Vvinifera.URGI.IGGP12Xv0.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")

BiocManager::install("BSgenome.Vvinifera.URGI.IGGP12Xv0")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

No vignettes available
Reference ManualPDF

Details

biocViews AnnotationData, BSgenome, Genetics, Vitis_vinifera
Version0.1
In Bioconductor sinceBioC 3.2 (R-3.2) (11 years)
License CC0
Depends BSgenome (>= 1.38.0)
Imports BSgenome
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package BSgenome.Vvinifera.URGI.IGGP12Xv0_0.1.tar.gz
Windows Binary (x86_64)
macOS Binary (big-sur-x86_64)
macOS Binary (sonoma-arm64)
Package Short Url https://bioconductor.org/packages/BSgenome.Vvinifera.URGI.IGGP12Xv0/
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