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BSgenome.Hsapiens.NCBI.GRCh38

This is the development version of BSgenome.Hsapiens.NCBI.GRCh38; for the stable release version, see BSgenome.Hsapiens.NCBI.GRCh38.

All versions 3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2, 3.1, 3.0, 2.14

Full genome sequences for Homo sapiens (GRCh38)


Bioconductor version: Development (3.24)

Full genome sequences for Homo sapiens (Human) as provided by NCBI (GRCh38, 2013-12-17) and stored in Biostrings objects.

Author: The Bioconductor Dev Team

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

Citation (from within R, enter citation("BSgenome.Hsapiens.NCBI.GRCh38")):

The Bioconductor Dev Team. BSgenome.Hsapiens.NCBI.GRCh38: Full genome sequences for Homo sapiens (GRCh38). doi:10.18129/B9.bioc.BSgenome.Hsapiens.NCBI.GRCh38, R package version 1.3.1000, https://bioconductor.org/packages/BSgenome.Hsapiens.NCBI.GRCh38.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")

BiocManager::install("BSgenome.Hsapiens.NCBI.GRCh38")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

No vignettes available
Reference ManualPDF

Details

biocViews AnnotationData, BSgenome, Genetics, Homo_sapiens
Version1.3.1000
In Bioconductor sinceBioC 2.14 (R-3.1) (12.5 years)
License Artistic-2.0
Depends BSgenome (>= 1.33.5)
Imports BSgenome
System Requirements
URL
See More
Suggests
Linking To
Enhances
Depends On Me
Imports Me cfDNAPro
Suggests Me bambu, BSgenome, ensembldb, FRASER, GenomeInfoDb, h5vc, HiCaptuRe, motifbreakR, MungeSumstats, NanoporeRNASeq, raer, scmeth
Links To Me

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package BSgenome.Hsapiens.NCBI.GRCh38_1.3.1000.tar.gz
Windows Binary (x86_64)
macOS Binary (big-sur-x86_64)
macOS Binary (sonoma-arm64)
Package Short Url https://bioconductor.org/packages/BSgenome.Hsapiens.NCBI.GRCh38/
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