Bioconductor Developer Survey 2026 Now Open!

BSgenome.Ecoli.NCBI.20080805

This is the development version of BSgenome.Ecoli.NCBI.20080805; for the stable release version, see BSgenome.Ecoli.NCBI.20080805.

All versions 3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2, 3.1, 3.0, 2.14, 2.13, 2.12, 2.11, 2.10, 2.9, 2.8, 2.7, 2.6, 2.5

Escherichia coli full genomes


Bioconductor version: Development (3.24)

Escherichia coli full genomes for several strains as provided by NCBI on 2008/08/05 and stored in Biostrings objects.

Author: The Bioconductor Dev Team

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

Citation (from within R, enter citation("BSgenome.Ecoli.NCBI.20080805")):

The Bioconductor Dev Team. BSgenome.Ecoli.NCBI.20080805: Escherichia coli full genomes. doi:10.18129/B9.bioc.BSgenome.Ecoli.NCBI.20080805, R package version 1.3.1000, https://bioconductor.org/packages/BSgenome.Ecoli.NCBI.20080805.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")

BiocManager::install("BSgenome.Ecoli.NCBI.20080805")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

No vignettes available
Reference ManualPDF

Details

biocViews AnnotationData, BSgenome, Escherichia_coli, Genetics
Version1.3.1000
In Bioconductor sinceBioC 2.5 (R-2.10) or earlier (> 17 years)
License Artistic-2.0
Depends BSgenome (>= 1.33.5)
Imports BSgenome
System Requirements
URL
See More
Suggests
Linking To
Enhances
Depends On Me
Imports Me Basic4Cseq
Suggests Me ChIPpeakAnno, diffHic, Motif2Site, ramwas
Links To Me

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package BSgenome.Ecoli.NCBI.20080805_1.3.1000.tar.gz
Windows Binary (x86_64)
macOS Binary (big-sur-x86_64)
macOS Binary (sonoma-arm64)
Package Short Url https://bioconductor.org/packages/BSgenome.Ecoli.NCBI.20080805/
Package Downloads ReportDownload Stats