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BSgenome.Alyrata.JGI.v1

This is the development version of BSgenome.Alyrata.JGI.v1; for the stable release version, see BSgenome.Alyrata.JGI.v1.

All versions 3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2, 3.1, 3.0, 2.14, 2.13, 2.12, 2.11, 2.10, 2.9, 2.8

Arabidopsis lyrata full genome (JGI version V1.0)


Bioconductor version: Development (3.24)

Arabidopsis lyrata 8x Release [project ID 4002920] as provided by JGI ( snapshot from March 24, 2011) and stored in Biostrings objects.

Author: Jian-Feng Mao and Ya-Long Guo, with acknowledgement to Detlef Weigel

Maintainer: Jian-Feng Mao <jianfeng.mao at gmail.com>

Citation (from within R, enter citation("BSgenome.Alyrata.JGI.v1")):

Jian-Feng Mao and Ya-Long Guo, with acknowledgement to Detlef Weigel. BSgenome.Alyrata.JGI.v1: Arabidopsis lyrata full genome (JGI version V1.0). doi:10.18129/B9.bioc.BSgenome.Alyrata.JGI.v1, R package version 1.0.1, https://bioconductor.org/packages/BSgenome.Alyrata.JGI.v1.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")

BiocManager::install("BSgenome.Alyrata.JGI.v1")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

No vignettes available
Reference ManualPDF

Details

biocViews Alyrata, AnnotationData, Genetics
Version1.0.1
In Bioconductor sinceBioC 2.8 (R-2.13) (15.5 years)
License Artistic-2.0
Depends BSgenome (>= 1.58.0)
Imports BSgenome
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package BSgenome.Alyrata.JGI.v1_1.0.1.tar.gz
Windows Binary (x86_64)
macOS Binary (big-sur-x86_64)
macOS Binary (sonoma-arm64)
Package Short Url https://bioconductor.org/packages/BSgenome.Alyrata.JGI.v1/
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