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sangerseqR

This is the development version of sangerseqR; for the stable release version, see sangerseqR.

All versions

3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2, 3.1, 3.0, 2.14

Tools for Sanger Sequencing Data in R

DOI: 10.18129/B9.bioc.sangerseqR

Bioconductor version: Development (3.24)

This package contains several tools for analyzing Sanger Sequencing data files in R, including reading .scf and .ab1 files, making basecalls and plotting chromatograms.

Author: Jonathon T. Hill, Bradley Demarest

Maintainer: Jonathon Hill <jhill at byu.edu>

Citation (from within R, enter citation("sangerseqR")):

Jonathon T. Hill, Bradley Demarest. sangerseqR: Tools for Sanger Sequencing Data in R. doi:10.18129/B9.bioc.sangerseqR, R package version 1.49.0, https://bioconductor.org/packages/sangerseqR.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")

BiocManager::install("sangerseqR")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("sangerseqR")

Details

Package Archives

Follow Installation instructions to use this package in your R session.