DOI: 10.18129/B9.bioc.qcmetrics  

This is the development version of qcmetrics; for the stable release version, see qcmetrics.

A Framework for Quality Control

Bioconductor version: Development (3.19)

The package provides a framework for generic quality control of data. It permits to create, manage and visualise individual or sets of quality control metrics and generate quality control reports in various formats.

Author: Laurent Gatto [aut, cre]

Maintainer: Laurent Gatto <laurent.gatto at uclouvain.be>

Citation (from within R, enter citation("qcmetrics")):


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if (!require("BiocManager", quietly = TRUE))

# The following initializes usage of Bioc devel


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HTML R Script Index file for the qcmetrics package vignette
PDF   Reference Manual


biocViews ImmunoOncology, MassSpectrometry, Microarray, Proteomics, QualityControl, ReportWriting, Software, Visualization
Version 1.41.0
In Bioconductor since BioC 2.13 (R-3.0) (10 years)
License GPL-2
Depends R (>= 3.3)
Imports Biobase, methods, knitr, tools, xtable, pander, S4Vectors
Suggests affy, MSnbase, ggplot2, lattice, mzR, BiocStyle, rmarkdown
URL http://lgatto.github.io/qcmetrics/articles/qcmetrics.html
BugReports https://github.com/lgatto/qcmetrics/issues
Depends On Me
Imports Me MSstatsQC
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package qcmetrics_1.41.0.tar.gz
Windows Binary
macOS Binary (x86_64)
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Source Repository git clone https://git.bioconductor.org/packages/qcmetrics
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/qcmetrics
Bioc Package Browser https://code.bioconductor.org/browse/qcmetrics/
Package Short Url https://bioconductor.org/packages/qcmetrics/
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