Welcome to the new bioconductor.org!

metabomxtr

This is the development version of metabomxtr; for the stable release version, see metabomxtr.

A package to run mixture models for truncated metabolomics data with normal or lognormal distributions


Bioconductor version: Development (3.19)

The functions in this package return optimized parameter estimates and log likelihoods for mixture models of truncated data with normal or lognormal distributions.

Author: Michael Nodzenski, Anna Reisetter, Denise Scholtens

Maintainer: Michael Nodzenski <michael.nodzenski at gmail.com>

Citation (from within R, enter citation("metabomxtr")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("metabomxtr")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("metabomxtr")
metabomxtr PDF R Script
mixnorm PDF R Script
Reference Manual PDF
NEWS Text

Details

biocViews ImmunoOncology, MassSpectrometry, Metabolomics, Software
Version 1.37.0
In Bioconductor since BioC 3.0 (R-3.1) (9.5 years)
License GPL-2
Depends methods, Biobase
Imports optimx, Formula, plyr, multtest, BiocParallel, ggplot2
System Requirements
URL
See More
Suggests xtable, reshape2
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package metabomxtr_1.37.0.tar.gz
Windows Binary metabomxtr_1.37.0.zip (64-bit only)
macOS Binary (x86_64) metabomxtr_1.37.0.tgz
macOS Binary (arm64) metabomxtr_1.37.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/metabomxtr
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/metabomxtr
Bioc Package Browser https://code.bioconductor.org/browse/metabomxtr/
Package Short Url https://bioconductor.org/packages/metabomxtr/
Package Downloads Report Download Stats