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geneClassifiers

This is the development version of geneClassifiers; for the stable release version, see geneClassifiers.

Application of gene classifiers


Bioconductor version: Development (3.19)

This packages aims for easy accessible application of classifiers which have been published in literature using an ExpressionSet as input.

Author: R Kuiper [cre, aut]

Maintainer: R Kuiper <r.kuiper.emc at gmail.com>

Citation (from within R, enter citation("geneClassifiers")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("geneClassifiers")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("geneClassifiers")
geneClassifiers and missing probesets PDF
geneClassifiers introduction PDF R Script
Reference Manual PDF
NEWS Text

Details

biocViews BiomedicalInformatics, Classification, GeneExpression, Microarray, Software, Survival
Version 1.27.0
In Bioconductor since BioC 3.5 (R-3.4) (7 years)
License GPL-2
Depends R (>= 3.6.0)
Imports utils, methods, stats, Biobase, BiocGenerics
System Requirements
URL https://doi.org/doi:10.18129/B9.bioc.geneClassifiers
Bug Reports https://github.com/rkuiper/geneClassifiers/issues
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package geneClassifiers_1.27.0.tar.gz
Windows Binary geneClassifiers_1.27.0.zip
macOS Binary (x86_64) geneClassifiers_1.27.0.tgz
macOS Binary (arm64) geneClassifiers_1.27.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/geneClassifiers
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/geneClassifiers
Bioc Package Browser https://code.bioconductor.org/browse/geneClassifiers/
Package Short Url https://bioconductor.org/packages/geneClassifiers/
Package Downloads Report Download Stats