flowViz

This is the development version of flowViz; for the stable release version, see flowViz.

All versions

3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2, 3.1, 3.0, 2.14, 2.13, 2.12, 2.11, 2.10, 2.9, 2.8, 2.7, 2.6, 2.5

Visualization for flow cytometry

Bioconductor version: Development (3.24)

Provides visualization tools for flow cytometry data.

Author: B. Ellis, R. Gentleman, F. Hahne, N. Le Meur, D. Sarkar, M. Jiang

Maintainer: Mike Jiang <mike at ozette.com>

Citation (from within R, enter citation("flowViz")):

B. Ellis, R. Gentleman, F. Hahne, N. Le Meur, D. Sarkar, M. Jiang. flowViz: Visualization for flow cytometry. doi:10.18129/B9.bioc.flowViz, R package version 1.77.1, https://bioconductor.org/packages/flowViz.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")

BiocManager::install("flowViz")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("flowViz")

Visualizing Gates with Flow Cytometry Data	HTML	R Script
Reference Manual	PDF
NEWS	Text

Need some help? Ask on the Bioconductor Support site!

Details

biocViews	CellBasedAssays, FlowCytometry, ImmunoOncology, Infrastructure, Software, Visualization
Version	1.77.1
In Bioconductor since	BioC 2.0 (R-2.5) (19.5 years)
License	Artistic-2.0
Depends	R (>= 2.7.0), flowCore (>= 1.41.9), lattice
Imports	stats4, Biobase, flowCore, graphics, grDevices, grid, KernSmooth, lattice, latticeExtra, MASS, methods, RColorBrewer, stats, utils, hexbin, IDPmisc
System Requirements
URL

Suggests	colorspace, flowStats, knitr, rmarkdown, markdown, testthat
Linking To
Enhances
Depends On Me	flowFP, flowTrans, flowVS
Imports Me	flowDensity, flowStats, flowTrans, openCyto
Suggests Me	flowBeads, flowClean, flowCore, flowTime, ggcyto
Links To Me
Build Report	Build Report, r-universe

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	flowViz_1.77.1.tar.gz
Windows Binary (x86_64)	flowViz_1.77.1.zip
macOS Binary (big-sur-x86_64)	flowViz_1.77.1.tgz
macOS Binary (sonoma-arm64)	flowViz_1.77.1.tgz
Source Repository	git clone https://git.bioconductor.org/packages/flowViz
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/flowViz
Package Short Url	https://bioconductor.org/packages/flowViz/
Package Downloads Report	Download Stats