epivizrData
This is the development version of epivizrData; for the stable release version, see epivizrData.
All Bioconductor versions of epivizrData
3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3
Data Management API for epiviz interactive visualization app
Bioconductor version: 3.24 · Package version: 1.41.0
Serve data from Bioconductor Objects through a WebSocket connection.
Author: Hector Corrada Bravo [aut, cre], Florin Chelaru [aut]
Maintainer: Hector Corrada Bravo <hcorrada at gmail.com>
Citation
From within R, enter citation("epivizrData"):
Hector Corrada Bravo, Florin Chelaru. epivizrData: Data Management API for epiviz interactive visualization app. doi:10.18129/B9.bioc.epivizrData, R package version 1.41.0, https://bioconductor.org/packages/epivizrData.
Generated from the package metadata; it may differ from the package's own citation.
Installation
To install this package, start R (version "4.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")
BiocManager::install("epivizrData")For older versions of R, please refer to the appropriate Bioconductor release.
Details
| Version | 1.41.0 |
| License | MIT + file LICENSE |
| URL | http://epiviz.github.io |
| Bug Reports | https://github.com/epiviz/epivizrData/issues |
| Last updated | 2026-04-28 |
| In Bioconductor since | BioC 3.3 (R-3.3) (10 years) |
| Downloads rank | 838 of 2,456 |
| Source branch | devel |
| Build report | Bioconductor build system, r-universe |
| biocViews | Infrastructure, Software, Visualization |
| Package Short Url | https://bioconductor.org/packages/epivizrData/ |
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("epivizrData")| epivizrData Usage | HTML | R Script |
| Reference Manual | ||
| NEWS | Text |
Download
Follow the installation instructions to use this package in your R session.
| Source package | epivizrData_1.41.0.tar.gz |
| Windows binary (x86_64) | epivizrData_1.41.0.zip |
| macOS binary (arm64) | epivizrData_1.41.0.tgz |
| macOS binary (x86_64) | epivizrData_1.41.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/epivizrData |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/epivizrData |
| Package Downloads Report | Download Stats |
Dependencies
Depends: R (>= 3.4), methods, epivizrServer (>= 1.1.1), Biobase
Imports: S4Vectors, GenomicRanges (>= 1.61.1), SummarizedExperiment (>= 1.39.1), OrganismDbi, GenomicFeatures (>= 1.61.4), Seqinfo, IRanges, ensembldb (>= 2.33.1)
Suggests: testthat, roxygen2, bumphunter, hgu133plus2.db, Mus.musculus, TxDb.Mmusculus.UCSC.mm10.knownGene, rjson, knitr, rmarkdown, BiocStyle, EnsDb.Mmusculus.v79, AnnotationHub, rtracklayer, utils, RMySQL, DBI, matrixStats
Reverse dependencies
Imports Me (3): epivizr, epivizrChart, scTreeViz