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This is the development version of bioCancer; for the stable release version, see bioCancer.

Interactive Multi-Omics Cancers Data Visualization and Analysis

Bioconductor version: Development (3.19)

This package is a Shiny App to visualize and analyse interactively Multi-Assays of Cancer Genomic Data.

Author: Karim Mezhoud [aut, cre]

Maintainer: Karim Mezhoud <kmezhoud at gmail.com>

Citation (from within R, enter citation("bioCancer")):


To install this package, start R (version "4.4") and enter:

if (!require("BiocManager", quietly = TRUE))

# The following initializes usage of Bioc devel


For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:

bioCancer: Interactive Multi-OMICS Cancers Data Visualization and Analysis HTML R Script
Reference Manual PDF


biocViews DataRepresentation, GUI, GeneExpression, GeneTarget, MultipleComparison, Network, Pathways, Reactome, Software, Visualization
Version 1.31.0
In Bioconductor since BioC 3.4 (R-3.3) (7.5 years)
License AGPL-3 | file LICENSE
Depends R (>= 3.6.0), radiant.data (>= 0.9.1), XML (>= 3.98)
Imports R.oo, R.methodsS3, httr, DT (>= 0.3), dplyr (>= 0.7.2), shiny (>= 1.0.5), AlgDesign (>=, import (>= 1.1.0), methods, AnnotationDbi, shinythemes, Biobase, geNetClassifier, org.Hs.eg.db, org.Bt.eg.db, DOSE, clusterProfiler, reactome.db, ReactomePA, DiagrammeR (<= 1.01), visNetwork, htmlwidgets, plyr, tibble, GO.db
System Requirements
URL https://kmezhoud.github.io/bioCancer/
Bug Reports https://github.com/kmezhoud/bioCancer/issues
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Suggests BiocStyle, prettydoc, rmarkdown, knitr, testthat (>= 0.10.0)
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package bioCancer_1.31.0.tar.gz
Windows Binary bioCancer_1.31.0.zip
macOS Binary (x86_64) bioCancer_1.31.0.tgz
macOS Binary (arm64) bioCancer_1.31.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/bioCancer
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/bioCancer
Bioc Package Browser https://code.bioconductor.org/browse/bioCancer/
Package Short Url https://bioconductor.org/packages/bioCancer/
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