arrayMvout
This is the development version of arrayMvout; for the stable release version, see arrayMvout.
All Bioconductor versions of arrayMvout
3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2, 3.1, 3.0, 2.14, 2.13, 2.12, 2.11, 2.10, 2.9, 2.8, 2.7, 2.6, 2.5
multivariate outlier detection for expression array QA
Bioconductor version: 3.24 · Package version: 1.71.0
This package supports the application of diverse quality metrics to AffyBatch instances, summarizing these metrics via PCA, and then performing parametric outlier detection on the PCs to identify aberrant arrays with a fixed Type I error rate
Author: Z. Gao, A. Asare, R. Wang, V. Carey
Maintainer: V. Carey <stvjc at channing.harvard.edu>
Citation
From within R, enter citation("arrayMvout"):
Z. Gao, A. Asare, R. Wang, V. Carey. arrayMvout: multivariate outlier detection for expression array QA. doi:10.18129/B9.bioc.arrayMvout, R package version 1.71.0, https://bioconductor.org/packages/arrayMvout.
Generated from the package metadata; it may differ from the package's own citation.
Installation
To install this package, start R (version "4.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")
BiocManager::install("arrayMvout")For older versions of R, please refer to the appropriate Bioconductor release.
Details
| Version | 1.71.0 |
| License | Artistic-2.0 |
| Last updated | 2026-04-28 |
| In Bioconductor since | BioC 2.5 or earlier (R-2.10) (16 years) |
| Downloads rank | 588 of 2,456 |
| Source branch | devel |
| Build report | Bioconductor build system, r-universe |
| biocViews | Infrastructure, Microarray, QualityControl, Software |
| Package Short Url | https://bioconductor.org/packages/arrayMvout/ |
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("arrayMvout")| arrayMvout -- multivariate outlier algorithm for expression arrays | R Script | |
| Reference Manual |
Download
Follow the installation instructions to use this package in your R session.
| Source package | arrayMvout_1.71.0.tar.gz |
| Windows binary (x86_64) | arrayMvout_1.71.0.zip |
| macOS binary (arm64) | arrayMvout_1.71.0.tgz |
| macOS binary (x86_64) | arrayMvout_1.71.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/arrayMvout |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/arrayMvout |
| Package Downloads Report | Download Stats |
Dependencies
Depends: R (>= 2.6.0), tools, methods, utils, parody, Biobase, affy
Imports: mdqc, affyContam, lumi
Suggests: MAQCsubset, mvoutData, lumiBarnes, affyPLM, affydata, hgu133atagcdf