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SNAGEE

This is the development version of SNAGEE; for the stable release version, see SNAGEE.

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Signal-to-Noise applied to Gene Expression Experiments

DOI: 10.18129/B9.bioc.SNAGEE

Bioconductor version: Development (3.24)

Signal-to-Noise applied to Gene Expression Experiments. Signal-to-noise ratios can be used as a proxy for quality of gene expression studies and samples. The SNRs can be calculated on any gene expression data set as long as gene IDs are available, no access to the raw data files is necessary. This allows to flag problematic studies and samples in any public data set.

Author: David Venet <davenet at ulb.ac.be>

Maintainer: David Venet <davenet at ulb.ac.be>

Citation (from within R, enter citation("SNAGEE")):

David Venet. SNAGEE: Signal-to-Noise applied to Gene Expression Experiments. doi:10.18129/B9.bioc.SNAGEE, R package version 1.53.0, https://bioconductor.org/packages/SNAGEE.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")

BiocManager::install("SNAGEE")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("SNAGEE")

Details

Package Archives

Follow Installation instructions to use this package in your R session.