Rhdf5lib
This is the development version of Rhdf5lib; for the stable release version, see Rhdf5lib.
All Bioconductor versions of Rhdf5lib
3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6
hdf5 library as an R package
Bioconductor version: 3.24 · Package version: 2.1.0
Provides C and C++ hdf5 libraries.
Author: Mike Smith [ctb] 
, Hugo Gruson [cre] , The HDF Group [cph]
Maintainer: Hugo Gruson <hugo.gruson at embl.de>
Citation
From within R, enter citation("Rhdf5lib"):
Mike Smith, Hugo Gruson, The HDF Group. Rhdf5lib: hdf5 library as an R package. doi:10.18129/B9.bioc.Rhdf5lib, R package version 2.1.0, https://bioconductor.org/packages/Rhdf5lib.
Generated from the package metadata; it may differ from the package's own citation.
Installation
To install this package, start R (version "4.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")
BiocManager::install("Rhdf5lib")For older versions of R, please refer to the appropriate Bioconductor release.
Details
| Version | 2.1.0 |
| License | Artistic-2.0 |
| URL | https://github.com/Huber-group-EMBL/Rhdf5lib |
| Bug Reports | https://github.com/Huber-group-EMBL/Rhdf5lib/issues |
| Last updated | 2026-04-28 |
| In Bioconductor since | BioC 3.6 (R-3.4) (8 years) |
| Downloads rank | 29 of 2,456 |
| Source branch | devel |
| Build report | Bioconductor build system, r-universe |
| biocViews | Infrastructure, Software |
| Package Short Url | https://bioconductor.org/packages/Rhdf5lib/ |
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("Rhdf5lib")| Linking to Rhdf5lib | HTML | R Script |
| Reference Manual | ||
| NEWS | Text |
Download
Follow the installation instructions to use this package in your R session.
| Source package | Rhdf5lib_2.1.0.tar.gz |
| Windows binary (x86_64) | Rhdf5lib_2.1.0.zip |
| macOS binary (arm64) | Rhdf5lib_2.1.0.tgz |
| macOS binary (x86_64) | Rhdf5lib_2.1.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/Rhdf5lib |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/Rhdf5lib |
| Package Downloads Report | Download Stats |
Reverse dependencies
Imports Me (3): epigraHMM, ondisc, rhdf5
Suggests Me (1): mbkmeans
Links To Me (19): alabaster.base, beachmat.hdf5, BigDataStatMeth, chihaya, cytolib, CytoML, DropletUtils, epigraHMM, flowWorkspace, h5mread, mbkmeans, methylclock, mzR, ncdfFlow, ondisc, rhdf5, rhdf5filters, smer, stPipe