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Rdisop

This is the development version of Rdisop; for the stable release version, see Rdisop.

Decomposition of Isotopic Patterns


Bioconductor version: Development (3.19)

Identification of metabolites using high precision mass spectrometry. MS Peaks are used to derive a ranked list of sum formulae, alternatively for a given sum formula the theoretical isotope distribution can be calculated to search in MS peak lists.

Author: Anton Pervukhin <apervukh at minet.uni-jena.de>, Steffen Neumann <sneumann at ipb-halle.de>

Maintainer: Steffen Neumann <sneumann at ipb-halle.de>

Citation (from within R, enter citation("Rdisop")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("Rdisop")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("Rdisop")
Molecule Identification with Rdisop PDF
Reference Manual PDF
INSTALL Text

Details

biocViews ImmunoOncology, MassSpectrometry, Metabolomics, Software
Version 1.63.0
In Bioconductor since BioC 2.2 (R-2.7) (16 years)
License GPL-2
Depends R (>= 2.0.0), Rcpp
Imports
System Requirements None
URL https://github.com/sneumann/Rdisop
Bug Reports https://github.com/sneumann/Rdisop/issues/new
See More
Suggests RUnit
Linking To Rcpp
Enhances
Depends On Me
Imports Me CorMID, enviGCMS
Suggests Me adductomicsR, MSnbase, RforProteomics
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package Rdisop_1.63.0.tar.gz
Windows Binary Rdisop_1.63.0.zip
macOS Binary (x86_64) Rdisop_1.63.0.tgz
macOS Binary (arm64) Rdisop_1.63.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/Rdisop
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/Rdisop
Bioc Package Browser https://code.bioconductor.org/browse/Rdisop/
Package Short Url https://bioconductor.org/packages/Rdisop/
Package Downloads Report Download Stats