ROntoTools

This is the development version of ROntoTools; for the stable release version, see ROntoTools.

All versions

3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2, 3.1, 3.0, 2.14, 2.13, 2.12

R Onto-Tools suite

Bioconductor version: Development (3.24)

Suite of tools for functional analysis.

Author: Calin Voichita <calin at wayne.edu> and Sahar Ansari <saharansari at wayne.edu> and Sorin Draghici <sorin at advaitabio.com>

Maintainer: Sorin Draghici <sorin at advaitabio.com>

Citation (from within R, enter citation("ROntoTools")):

Calin Voichita and Sahar Ansari and Sorin Draghici. ROntoTools: R Onto-Tools suite. doi:10.18129/B9.bioc.ROntoTools, R package version 2.41.0, https://bioconductor.org/packages/ROntoTools.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")

BiocManager::install("ROntoTools")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("ROntoTools")

ROntoTools	PDF	R Script
Reference Manual	PDF
NEWS	Text
LICENSE	Text

Need some help? Ask on the Bioconductor Support site!

Details

biocViews	GraphsAndNetworks, Microarray, NetworkAnalysis, Software
Version	2.41.0
In Bioconductor since	BioC 2.12 (R-3.0) (13.5 years)
License	CC BY-NC-ND 4.0 + file LICENSE
Depends	methods, graph, boot, KEGGREST, KEGGgraph, Rgraphviz
Imports
System Requirements
URL

Suggests	RUnit, BiocGenerics
Linking To
Enhances
Depends On Me	BLMA
Imports Me	mirIntegrator
Suggests Me	RCPA
Links To Me
Build Report	Build Report, r-universe

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	ROntoTools_2.41.0.tar.gz
Windows Binary (x86_64)	ROntoTools_2.41.0.zip
macOS Binary (big-sur-x86_64)	ROntoTools_2.41.0.tgz
macOS Binary (sonoma-arm64)	ROntoTools_2.41.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/ROntoTools
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/ROntoTools
Package Short Url	https://bioconductor.org/packages/ROntoTools/
Package Downloads Report	Download Stats