RBGL

This is the development version of RBGL; for the stable release version, see RBGL.

All versions

3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2, 3.1, 3.0, 2.14, 2.13, 2.12, 2.11, 2.10, 2.9, 2.8, 2.7, 2.6, 2.5

An interface to the BOOST graph library

Bioconductor version: Development (3.24)

A fairly extensive and comprehensive interface to the graph algorithms contained in the BOOST library.

Author: Vince Carey [aut], Li Long [aut], R. Gentleman [aut], Emmanuel Taiwo [ctb] (Converted RBGL vignette from Sweave to RMarkdown / HTML.), Bioconductor Package Maintainer [cre]

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

Citation (from within R, enter citation("RBGL")):

Vince Carey, Li Long, R. Gentleman. RBGL: An interface to the BOOST graph library. doi:10.18129/B9.bioc.RBGL, R package version 1.89.0, https://bioconductor.org/packages/RBGL.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")

BiocManager::install("RBGL")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("RBGL")

RBGL Overview	HTML	R Script
Reference Manual	PDF
NEWS	Text

Need some help? Ask on the Bioconductor Support site!

Details

biocViews	GraphAndNetwork, Network, Software
Version	1.89.0
In Bioconductor since	BioC 1.6 (R-2.1) or earlier (> 21.5 years)
License	Artistic-2.0
Depends	graph, methods
Imports	methods
System Requirements
URL	http://www.bioconductor.org

Suggests	Rgraphviz, XML, RUnit, BiocGenerics, BiocStyle, knitr
Linking To	BH
Enhances
Depends On Me	apComplex, BioNet, CellNOptR, fgga, PerfMeas
Imports Me	BiDAG, BiocPkgTools, biocViews, CAMERA, Category, ChIPpeakAnno, CHRONOS, clustNet, CytoML, DEGraph, DEsubs, eff2, EventPointer, flowWorkspace, GenomicInteractionNodes, GOstats, micd, NCIgraph, ontoProc, openCyto, OrganismDbi, pcalg, rags2ridges, RANKS, SEMgraph, SID, spatialdataR, VariantFiltering
Suggests Me	archeofrag, archeofrag.gui, DEGraph, G4SNVHunter, GeneNetworkBuilder, graph, gwascat, KEGGgraph, keggorthology, maGUI, PFCI, rBiopaxParser, VariantTools, yeastExpData
Links To Me
Build Report	Build Report, r-universe

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	RBGL_1.89.0.tar.gz
Windows Binary (x86_64)	RBGL_1.89.0.zip (64-bit only)
macOS Binary (big-sur-x86_64)	RBGL_1.89.0.tgz
macOS Binary (sonoma-arm64)	RBGL_1.89.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/RBGL
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/RBGL
Package Short Url	https://bioconductor.org/packages/RBGL/
Package Downloads Report	Download Stats