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Prostar

This is the development version of Prostar; for the stable release version, see Prostar.

Provides a GUI for DAPAR


Bioconductor version: Development (3.19)

This package provides a GUI interface for the DAPAR package. The package Prostar (Proteomics statistical analysis with R) is a Bioconductor distributed R package which provides all the necessary functions to analyze quantitative data from label-free proteomics experiments. Contrarily to most other similar R packages, it is endowed with rich and user-friendly graphical interfaces, so that no programming skill is required.

Author: Thomas Burger [aut], Florence Combes [aut], Samuel Wieczorek [cre, aut]

Maintainer: Samuel Wieczorek <samuel.wieczorek at cea.fr>

Citation (from within R, enter citation("Prostar")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("Prostar")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("Prostar")
Prostar User Manual PDF R Script
Reference Manual PDF
README Text
NEWS Text

Details

biocViews GUI, MassSpectrometry, Normalization, Preprocessing, Proteomics, Software
Version 1.35.1
In Bioconductor since BioC 3.2 (R-3.2) (8.5 years)
License Artistic-2.0
Depends R (>= 4.4.0)
Imports DAPAR(>= 1.35.0), DAPARdata(>= 1.30.0), rhandsontable, data.table, shiny, shinyBS, shinyAce, highcharter, htmlwidgets, webshot, shinythemes, later, shinycssloaders, future, promises, shinyjqui, tibble, ggplot2, gplots, shinyjs, vioplot, Biobase
System Requirements
URL http://www.prostar-proteomics.org/
Bug Reports https://github.com/prostarproteomics/Prostar/issues
See More
Suggests BiocStyle, BiocManager, testthat, shinyTree, knitr, colourpicker, gtools, XML, R.utils, RColorBrewer, DT, shinyWidgets, sass, rclipboard
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package Prostar_1.35.1.tar.gz
Windows Binary Prostar_1.35.1.zip
macOS Binary (x86_64) Prostar_1.35.1.tgz
macOS Binary (arm64) Prostar_1.35.1.tgz
Source Repository git clone https://git.bioconductor.org/packages/Prostar
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/Prostar
Bioc Package Browser https://code.bioconductor.org/browse/Prostar/
Package Short Url https://bioconductor.org/packages/Prostar/
Package Downloads Report Download Stats