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DEScan2

This is the development version of DEScan2; for the stable release version, see DEScan2.

All versions

3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7

Differential Enrichment Scan 2

DOI: 10.18129/B9.bioc.DEScan2

Bioconductor version: Development (3.24)

Integrated peak and differential caller, specifically designed for broad epigenomic signals.

Author: Dario Righelli [aut, cre], John Koberstein [aut], Bruce Gomes [aut], Nancy Zhang [aut], Claudia Angelini [aut], Lucia Peixoto [aut], Davide Risso [aut]

Maintainer: Dario Righelli <dario.righelli at gmail.com>

Citation (from within R, enter citation("DEScan2")):

Dario Righelli, John Koberstein, Bruce Gomes, Nancy Zhang, Claudia Angelini, Lucia Peixoto, Davide Risso. DEScan2: Differential Enrichment Scan 2. doi:10.18129/B9.bioc.DEScan2, R package version 1.33.0, https://bioconductor.org/packages/DEScan2.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")

BiocManager::install("DEScan2")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("DEScan2")

Details

Package Archives

Follow Installation instructions to use this package in your R session.