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ZarrArray

This is the development version of ZarrArray; for the stable release version, see ZarrArray.

All versions

3.24 (devel), 3.23 (release)

Bring Zarr datasets in R as DelayedArray objects

DOI: 10.18129/B9.bioc.ZarrArray

Bioconductor version: Development (3.24)

The ZarrArray package leverages the Rarr package to bring Zarr datasets in R as DelayedArray objects. The main class in the package is the ZarrArray class. A ZarrArray object is an array-like object that represents a Zarr dataset in R. ZarrArray objects are DelayedArray derivatives and therefore support all operations (delayed or block-processed) supported by DelayedArray objects.

Author: Hervé Pagès [aut, cre] ORCID: 0009-0002-8272-4522 , Mike Smith [aut] ORCID: 0000-0002-7800-3848 , Hugo Gruson [aut] ORCID: 0000-0002-4094-1476 , Artür Manukyan [aut] ORCID: 0000-0002-0441-9517 , Levi Waldron [fnd] ORCID: 0000-0003-2725-0694

Maintainer: Hervé Pagès <hpages.on.github at gmail.com>

Citation (from within R, enter citation("ZarrArray")):

Hervé Pagès, Mike Smith, Hugo Gruson, Artür Manukyan. ZarrArray: Bring Zarr datasets in R as DelayedArray objects. doi:10.18129/B9.bioc.ZarrArray, R package version 1.1.7, https://bioconductor.org/packages/ZarrArray.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")

BiocManager::install("ZarrArray")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("ZarrArray")

Details

Package Archives

Follow Installation instructions to use this package in your R session.