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cMap2data

This is the released version of cMap2data; for the devel version, see cMap2data.

All versions 3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2, 3.1, 3.0, 2.14, 2.13, 2.12

Connectivity Map (version 2) Data


Bioconductor version: Release (3.23)

Data package which provides default drug profiles for the DrugVsDisease package as well as associated gene lists and data clusters used by the DrugVsDisease package.

Author: C. Pacini

Maintainer: J. Saez-Rodriguez <saezrodriguez at ebi.ac.uk>

Citation (from within R, enter citation("cMap2data")):

C. Pacini. cMap2data: Connectivity Map (version 2) Data. doi:10.18129/B9.bioc.cMap2data, R package version 1.48.0, https://bioconductor.org/packages/cMap2data.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("cMap2data")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("cMap2data")
cMap2data PDF R Script
Reference ManualPDF

Details

biocViews ExperimentData, GEO, Homo_sapiens_Data, MicroarrayData
Version1.48.0
In Bioconductor sinceBioC 2.12 (R-3.0) (13.5 years)
License GPL-3
Depends R (>= 2.10)
Imports
System Requirements
URL
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Suggests
Linking To
Enhances
Depends On Me DrugVsDisease
Imports Me
Suggests Me
Links To Me
Build Report Build Report, r-universe

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package cMap2data_1.48.0.tar.gz
Windows Binary (x86_64)
macOS Binary (big-sur-x86_64)
macOS Binary (sonoma-arm64)
Source Repositorygit clone https://git.bioconductor.org/packages/cMap2data
Source Repository (Developer Access)git clone git@git.bioconductor.org:packages/cMap2data
Package Short Url https://bioconductor.org/packages/cMap2data/
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