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RnaSeqSampleSizeData

This is the released version of RnaSeqSampleSizeData; for the devel version, see RnaSeqSampleSizeData.

All versions 3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2, 3.1

RnaSeqSampleSizeData


Bioconductor version: Release (3.23)

RnaSeqSampleSizeData package provides the read counts and dispersion distribution from real RNA-seq experiments. It can be used by RnaSeqSampleSize package to estimate sample size and power for RNA-seq experiment design.

Author: Shilin Zhao, Chung-I Li, Yan Guo, Quanhu Sheng, Yu Shyr

Maintainer: Shilin Zhao <zhaoshilin at gmail.com>

Citation (from within R, enter citation("RnaSeqSampleSizeData")):

Shilin Zhao, Chung-I Li, Yan Guo, Quanhu Sheng, Yu Shyr. RnaSeqSampleSizeData: RnaSeqSampleSizeData. doi:10.18129/B9.bioc.RnaSeqSampleSizeData, R package version 1.44.0, https://bioconductor.org/packages/RnaSeqSampleSizeData.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("RnaSeqSampleSizeData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("RnaSeqSampleSizeData")
RnaSeqSampleSizeData: Read counts and dispersion distribution from real data for sample size estimation of RNA-seq experiments PDF R Script
Reference ManualPDF
NEWSText

Details

biocViews CancerData, ExperimentData, RNASeqData
Version1.44.0
In Bioconductor sinceBioC 3.1 (R-3.2) (11.5 years)
License GPL (>= 2)
Depends edgeR, R (>= 2.10)
Imports
System Requirements
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Suggests BiocStyle, knitr
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Depends On Me RnaSeqSampleSize
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package RnaSeqSampleSizeData_1.44.0.tar.gz
Windows Binary (x86_64)
macOS Binary (big-sur-x86_64)
macOS Binary (sonoma-arm64)
Source Repositorygit clone https://git.bioconductor.org/packages/RnaSeqSampleSizeData
Source Repository (Developer Access)git clone git@git.bioconductor.org:packages/RnaSeqSampleSizeData
Package Short Url https://bioconductor.org/packages/RnaSeqSampleSizeData/
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