ITALICS

This is the released version of ITALICS; for the devel version, see ITALICS.

All versions

3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2, 3.1, 3.0, 2.14, 2.13, 2.12, 2.11, 2.10, 2.9, 2.8, 2.7, 2.6, 2.5

ITALICS

Bioconductor version: Release (3.23)

A Method to normalize of Affymetrix GeneChip Human Mapping 100K and 500K set

Author: Guillem Rigaill, Philippe Hupe

Maintainer: Guillem Rigaill <italics at curie.fr>

Citation (from within R, enter citation("ITALICS")):

Guillem Rigaill, Philippe Hupe. ITALICS: ITALICS. doi:10.18129/B9.bioc.ITALICS, R package version 2.72.0, https://bioconductor.org/packages/ITALICS.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("ITALICS")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("ITALICS")

ITALICS	PDF	R Script
Reference Manual	PDF

Need some help? Ask on the Bioconductor Support site!

Details

biocViews	CopyNumberVariation, Microarray, Software
Version	2.72.0
In Bioconductor since	BioC 2.3 (R-2.8) (18 years)
License	GPL-2
Depends	R (>= 2.0.0), GLAD, ITALICSData, oligo, affxparser, pd.mapping50k.xba240
Imports	affxparser, DBI, GLAD, oligo, oligoClasses, stats
System Requirements
URL	http://bioinfo.curie.fr

Suggests	pd.mapping50k.hind240, pd.mapping250k.sty, pd.mapping250k.nsp
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report	Build Report, r-universe

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	ITALICS_2.72.0.tar.gz
Windows Binary (x86_64)	ITALICS_2.72.0.zip (64-bit only)
macOS Binary (big-sur-x86_64)	ITALICS_2.72.0.tgz
macOS Binary (sonoma-arm64)	ITALICS_2.72.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/ITALICS
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/ITALICS
Package Short Url	https://bioconductor.org/packages/ITALICS/
Package Downloads Report	Download Stats