• Home
• Bioconductor 3.23
• Software Packages
• CoverageView

CoverageView

This is the released version of CoverageView; for the devel version, see CoverageView.

All versions

3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2, 3.1, 3.0, 2.14

Coverage visualization package for R

DOI: 10.18129/B9.bioc.CoverageView

Bioconductor version: Release (3.23)

This package provides a framework for the visualization of genome coverage profiles. It can be used for ChIP-seq experiments, but it can be also used for genome-wide nucleosome positioning experiments or other experiment types where it is important to have a framework in order to inspect how the coverage distributed across the genome

Author: Ernesto Lowy

Maintainer: Ernesto Lowy <ernestolowy at gmail.com>

Citation (from within R, enter citation("CoverageView")):

Ernesto Lowy. CoverageView: Coverage visualization package for R. doi:10.18129/B9.bioc.CoverageView, R package version 1.50.0, https://bioconductor.org/packages/CoverageView.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("CoverageView")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("CoverageView")

Details

Package Archives

Follow Installation instructions to use this package in your R session.