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AIMS

This is the released version of AIMS; for the devel version, see AIMS.

All versions

3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2, 3.1

AIMS : Absolute Assignment of Breast Cancer Intrinsic Molecular Subtype

DOI: 10.18129/B9.bioc.AIMS

Bioconductor version: Release (3.23)

This package contains the AIMS implementation. It contains necessary functions to assign the five intrinsic molecular subtypes (Luminal A, Luminal B, Her2-enriched, Basal-like, Normal-like). Assignments could be done on individual samples as well as on dataset of gene expression data.

Author: Eric R. Paquet, Michael T. Hallett

Maintainer: Eric R Paquet <eric.r.paquet at gmail.com>

Citation (from within R, enter citation("AIMS")):

Eric R. Paquet, Michael T. Hallett. AIMS: AIMS : Absolute Assignment of Breast Cancer Intrinsic Molecular Subtype. doi:10.18129/B9.bioc.AIMS, R package version 1.44.0, https://bioconductor.org/packages/AIMS.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("AIMS")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("AIMS")

Details

Package Archives

Follow Installation instructions to use this package in your R session.