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AGDEX

This is the released version of AGDEX; for the devel version, see AGDEX.

All versions 3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2, 3.1, 3.0, 2.14, 2.13, 2.12, 2.11, 2.10, 2.9

Agreement of Differential Expression Analysis


Bioconductor version: Release (3.23)

A tool to evaluate agreement of differential expression for cross-species genomics

Author: Stan Pounds <stanley.pounds at stjude.org>; Cuilan Lani Gao <cuilan.gao at stjude.org>

Maintainer: Cuilan lani Gao <cuilan.gao at stjude.org>

Citation (from within R, enter citation("AGDEX")):

Stan Pounds, Cuilan Lani Gao. AGDEX: Agreement of Differential Expression Analysis. doi:10.18129/B9.bioc.AGDEX, R package version 1.60.0, https://bioconductor.org/packages/AGDEX.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("AGDEX")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("AGDEX")
AGDEX.pdf PDF R Script
Reference ManualPDF

Details

biocViews GeneExpression, Genetics, Microarray, Software
Version1.60.0
In Bioconductor sinceBioC 2.9 (R-2.14) (15 years)
License GPL Version 2 or later
Depends R (>= 2.10), Biobase, GSEABase
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package AGDEX_1.60.0.tar.gz
Windows Binary (x86_64) AGDEX_1.60.0.zip
macOS Binary (big-sur-x86_64) AGDEX_1.60.0.tgz
macOS Binary (sonoma-arm64) AGDEX_1.60.0.tgz
Source Repositorygit clone https://git.bioconductor.org/packages/AGDEX
Source Repository (Developer Access)git clone git@git.bioconductor.org:packages/AGDEX
Package Short Url https://bioconductor.org/packages/AGDEX/
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