Welcome to the new bioconductor.org!

gpaExample

Example data for the GPA package (Genetic analysis incorporating Pleiotropy and Annotation)


Bioconductor version: Release (3.18)

Example data for the GPA package, consisting of the p-values of 1,219,805 SNPs for five psychiatric disorder GWAS from the psychiatric GWAS consortium (PGC), with the annotation data using genes preferentially expressed in the central nervous system (CNS).

Author: Dongjun Chung, Carter Allen

Maintainer: Dongjun Chung <dongjun.chung at gmail.com>

Citation (from within R, enter citation("gpaExample")):

Installation

To install this package, start R (version "4.3") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("gpaExample")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

Reference Manual PDF

Details

biocViews ExperimentData, Homo_sapiens_Data, SNPData
Version 1.14.0
License GPL (>= 2)
Depends R (>= 4.0.0)
Imports
System Requirements
URL http://dongjunchung.github.io/GPA/
See More
Suggests
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me GPA
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package gpaExample_1.14.0.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/gpaExample
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/gpaExample
Package Short Url https://bioconductor.org/packages/gpaExample/
Package Downloads Report Download Stats