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Example data for the GPA package (Genetic analysis incorporating Pleiotropy and Annotation)

Bioconductor version: Release (3.18)

Example data for the GPA package, consisting of the p-values of 1,219,805 SNPs for five psychiatric disorder GWAS from the psychiatric GWAS consortium (PGC), with the annotation data using genes preferentially expressed in the central nervous system (CNS).

Author: Dongjun Chung, Carter Allen

Maintainer: Dongjun Chung <dongjun.chung at gmail.com>

Citation (from within R, enter citation("gpaExample")):


To install this package, start R (version "4.3") and enter:

if (!require("BiocManager", quietly = TRUE))


For older versions of R, please refer to the appropriate Bioconductor release.


Reference Manual PDF


biocViews ExperimentData, Homo_sapiens_Data, SNPData
Version 1.14.0
License GPL (>= 2)
Depends R (>= 4.0.0)
System Requirements
URL http://dongjunchung.github.io/GPA/
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Source Package gpaExample_1.14.0.tar.gz
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Package Short Url https://bioconductor.org/packages/gpaExample/
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