TENxPBMCData
This is the released version of TENxPBMCData; for the devel version, see TENxPBMCData.
All Bioconductor versions of TENxPBMCData
3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8
PBMC data from 10X Genomics
Bioconductor version: 3.23 · Package version: 1.30.0
Single-cell RNA-seq data for on PBMC cells, generated by 10X Genomics.
Author: Kasper D. Hansen [aut], Davide Risso [aut], Milan Malfait [ctb], Jeroen Gilis [ctb], Theodore Killian [ctb], Murat Cem Kose [ctb], Chong Tang [ctb], Teun van den Brand [ctb], Dania Machlab [ctb], Stephanie Hicks [aut, cre]
Maintainer: Stephanie Hicks <shicks19 at jhu.edu>
Citation
From within R, enter citation("TENxPBMCData"):
Kasper D. Hansen, Davide Risso, Stephanie Hicks. TENxPBMCData: PBMC data from 10X Genomics. doi:10.18129/B9.bioc.TENxPBMCData, R package version 1.30.0, https://bioconductor.org/packages/TENxPBMCData.
Generated from the package metadata; it may differ from the package's own citation.
Installation
To install this package, start R (version "4.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("TENxPBMCData")For older versions of R, please refer to the appropriate Bioconductor release.
Details
| Version | 1.30.0 |
| License | CC BY 4.0 |
| Last updated | 2026-05-05 |
| In Bioconductor since | BioC 3.8 (R-3.5) (7 years) |
| Downloads rank | 17 of 434 |
| Source branch | RELEASE_3_23 |
| Build report | Bioconductor build system, r-universe |
| biocViews | ExperimentData, ExperimentHub, ExpressionData, RNASeqData, SequencingData, SingleCellData |
| Package Short Url | https://bioconductor.org/packages/TENxPBMCData/ |
Documentation
| Reference Manual |
Download
Follow the installation instructions to use this package in your R session.
| Source package | TENxPBMCData_1.30.0.tar.gz |
| Source Repository | git clone https://git.bioconductor.org/packages/TENxPBMCData |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/TENxPBMCData |
| Package Downloads Report | Download Stats |
Dependencies
Depends: SingleCellExperiment, HDF5Array
Imports: AnnotationHub, ExperimentHub
Suggests: rmarkdown, knitr, BiocStyle, snow, BiocFileCache, BiocParallel
Reverse dependencies
Imports Me (1): singleCellTK
Suggests Me (17): adverSCarial, ASURAT, celda, concordexR, decontX, ExperimentSubset, glmGamPoi, GSVA, iSEE, mbkmeans, scGraphVerse, schex, scone, scry, Seqtometry, sketchR, transformGamPoi