Welcome to the new bioconductor.org!

HIVcDNAvantWout03

T cell line infections with HIV-1 LAI (BRU)


Bioconductor version: Release (3.18)

The expression levels of approximately 4600 cellular RNA transcripts were assessed in CD4+ T cell lines at different times after infection with HIV-1BRU using DNA microarrays. This data corresponds to the first block of a 12 block array image (001030_08_1.GEL) in the first data set (2000095918 A) in the first experiment (CEM LAI vs HI-LAI 24hr). There are two data sets, which are part of a dye-swap experiment with replicates, representing the Cy3 (green) absorption intensities for channel 1 (hiv1raw) and the Cy5 (red) absorption intensities for channel 2 (hiv2raw).

Author: Dr. Angelique van't Wout, Department of Microbiology, University of Washington

Maintainer: Chris Fraley <fraley at stat.washington.edu>

Citation (from within R, enter citation("HIVcDNAvantWout03")):

Installation

To install this package, start R (version "4.3") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("HIVcDNAvantWout03")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

Reference Manual PDF

Details

biocViews ExperimentData, HIVData, MicroarrayData, TwoChannelData
Version 1.42.0
License GPL (>= 2)
Depends
Imports
System Requirements
URL http://expression.microslu.washington.edu/expression/vantwoutjvi2002.html
See More
Suggests
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package HIVcDNAvantWout03_1.42.0.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/HIVcDNAvantWout03
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/HIVcDNAvantWout03
Package Short Url https://bioconductor.org/packages/HIVcDNAvantWout03/
Package Downloads Report Download Stats