survcomp
Performance Assessment and Comparison for Survival Analysis
Bioconductor version: 3.23 · Package version: 1.62.0
Other Bioconductor versions
devel is the development version; release is the current stable one.
3.24 (devel), 3.23 (release)
Assessment and Comparison for Performance of Risk Prediction (Survival) Models.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("survcomp")Details
| Maintainer | Benjamin Haibe-Kains <benjamin.haibe.kains@utoronto.ca> |
| Author | Benjamin Haibe-Kains [aut, cre], Markus Schroeder [aut], Catharina Olsen [aut], Christos Sotiriou [aut], Gianluca Bontempi [aut], John Quackenbush [aut], Samuel Branders [aut], Zhaleh Safikhani [aut] |
| License | Artistic-2.0 |
| URL | http://www.pmgenomics.ca/bhklab/ |
| Source branch | RELEASE_3_23 |
| Build report | Bioconductor build system, r-universe |
| biocViews | DifferentialExpression, GeneExpression, Software, Visualization |
| Package Short Url | https://bioconductor.org/packages/survcomp/ |
Citation
From within R, enter citation("survcomp"):
Benjamin Haibe-Kains, Markus Schroeder, Catharina Olsen, Christos Sotiriou, Gianluca Bontempi, John Quackenbush, Samuel Branders, Zhaleh Safikhani. survcomp: Performance Assessment and Comparison for Survival Analysis. doi:10.18129/B9.bioc.survcomp, R package version 1.62.0, https://bioconductor.org/packages/survcomp.
Generated from the package metadata; it may differ from the package's own citation.
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | survcomp_1.62.0.tar.gz |
| Windows binary (x86_64) | survcomp_1.62.0.zip |
| macOS binary (arm64) | survcomp_1.62.0.tgz |
| macOS binary (x86_64) | survcomp_1.62.0.tgz |
Dependencies
Depends: survival, prodlim, R (>= 3.4)
Imports: ipred, SuppDists, KernSmooth, survivalROC, bootstrap, grid, rmeta, stats, graphics
Suggests: Hmisc, clinfun, xtable, Biobase, BiocManager
Reverse dependencies
Depends On Me (1): genefu
Imports Me (8): asuri, bigPLScox, Coxmos, metaseqR2, PDATK, pencal, plsRcox, SIGN
Suggests Me (8): breastCancerMAINZ, breastCancerNKI, breastCancerTRANSBIG, breastCancerUNT, breastCancerUPP, breastCancerVDX, E2E, GSgalgoR