To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("rDGIdb")

In most cases, you don't need to download the package archive at all.

rDGIdb

 

R Wrapper for DGIdb

Bioconductor version: Release (3.5)

The rDGIdb package provides a wrapper for the Drug Gene Interaction Database (DGIdb). For simplicity, the wrapper query function and output resembles the user interface and results format provided on the DGIdb website (http://dgidb.genome.wustl.edu/).

Author: Thomas Thurnherr, Franziska Singer, Daniel J. Stekhoven, and Niko Beerenwinkel

Maintainer: Thomas Thurnherr <thomas.thurnherr at bsse.ethz.ch>

Citation (from within R, enter citation("rDGIdb")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("rDGIdb")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("rDGIdb")

 

PDF R Script Query DGIdb using R
PDF   Reference Manual
Text   NEWS
Text   LICENSE

Details

biocViews Annotation, FunctionalGenomics, Pharmacogenetics, Pharmacogenomics, ResearchField, Software, WorkflowStep
Version 1.2.0
In Bioconductor since BioC 3.4 (R-3.3) (1 year)
License MIT + file LICENSE
Depends
Imports jsonlite, httr, methods, graphics
LinkingTo
Suggests BiocStyle, knitr, testthat
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source rDGIdb_1.2.0.tar.gz
Windows Binary rDGIdb_1.2.0.zip
Mac OS X 10.11 (El Capitan) rDGIdb_1.2.0.tgz
Subversion source (username/password: readonly)
Git source https://github.com/Bioconductor-mirror/rDGIdb/tree/release-3.5
Package Short Url http://bioconductor.org/packages/rDGIdb/
Package Downloads Report Download Stats

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