onlineFDR

DOI: 10.18129/B9.bioc.onlineFDR    

Online FDR control

Bioconductor version: Release (3.8)

This package allows users to control the false discovery rate for online hypothesis testing, where hypotheses arrive sequentially in a stream, as presented by Javanmard and Montanari (2015, 2018). In this framework, a null hypothesis is rejected based only on the previous decisions, as the future p-values and the number of hypotheses to be tested are unknown.

Author: David Robertson [aut, cre], Adel Javanmard [aut], Andrea Montanari [aut], Natasha Karp [aut]

Maintainer: David Robertson <david.robertson at mrc-bsu.cam.ac.uk>

Citation (from within R, enter citation("onlineFDR")):

Installation

To install this package, start R (version "3.5") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("onlineFDR", version = "3.8")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("onlineFDR")

 

HTML R Script Using the onlineFDR package
PDF   Reference Manual
Text   NEWS

Details

biocViews MultipleComparison, Software, StatisticalMethod
Version 1.0.0
License GPL-3
Depends
Imports stats
LinkingTo
Suggests knitr, rmarkdown, testthat
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package onlineFDR_1.0.0.tar.gz
Windows Binary onlineFDR_1.0.0.zip
Mac OS X 10.11 (El Capitan) onlineFDR_1.0.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/onlineFDR
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/onlineFDR
Package Short Url http://bioconductor.org/packages/onlineFDR/
Package Downloads Report Download Stats

Documentation »

Bioconductor

R / CRAN packages and documentation

Support »

Please read the posting guide. Post questions about Bioconductor to one of the following locations: