flowPloidy
Analyze flow cytometer data to determine sample ploidy
Bioconductor version: 3.23 · Package version: 1.38.0
Other Bioconductor versions
devel is the development version; release is the current stable one.
3.24 (devel), 3.23 (release)
Determine sample ploidy via flow cytometry histogram analysis. Reads Flow Cytometry Standard (FCS) files via the flowCore bioconductor package, and provides functions for determining the DNA ploidy of samples based on internal standards.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("flowPloidy")Details
| Maintainer | Tyler Smith <tyler@plantarum.ca> |
| Author | Tyler Smith <tyler@plantarum.ca> |
| License | GPL-3 |
| URL | https://github.com/plantarum/flowPloidy |
| Bug Reports | https://github.com/plantarum/flowPloidy/issues |
| Source branch | RELEASE_3_23 |
| Build report | Bioconductor build system, r-universe |
| biocViews | FlowCytometry, GUI, Regression, Software, Visualization |
| Package Short Url | https://bioconductor.org/packages/flowPloidy/ |
Citation
From within R, enter citation("flowPloidy"):
Tyler Smith. flowPloidy: Analyze flow cytometer data to determine sample ploidy. doi:10.18129/B9.bioc.flowPloidy, R package version 1.38.0, https://bioconductor.org/packages/flowPloidy.
Generated from the package metadata; it may differ from the package's own citation.
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | flowPloidy_1.38.0.tar.gz |
| Windows binary (x86_64) | flowPloidy_1.38.0.zip |
| macOS binary (arm64) | flowPloidy_1.38.0.tgz |
| macOS binary (x86_64) | flowPloidy_1.38.0.tgz |
Dependencies
Imports: flowCore, car, caTools, knitr, rmarkdown, minpack.lm, shiny, methods, graphics, stats, utils
Suggests: flowPloidyData, testthat