biobtreeR
Using biobtree tool from R
Bioconductor version: 3.23 · Package version: 1.24.0
Other Bioconductor versions
devel is the development version; release is the current stable one.
3.24 (devel), 3.23 (release)
The biobtreeR package provides an interface to [biobtree](https://github.com/tamerh/biobtree) tool which covers large set of bioinformatics datasets and allows search and chain mappings functionalities.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("biobtreeR")Details
| Maintainer | Tamer Gur <tgur@ebi.ac.uk> |
| Author | Tamer Gur |
| License | MIT + file LICENSE |
| URL | https://github.com/tamerh/biobtreeR |
| Bug Reports | https://github.com/tamerh/biobtreeR/issues |
| Source branch | RELEASE_3_23 |
| Build report | Bioconductor build system, r-universe |
| biocViews | Annotation, Software |
| Package Short Url | https://bioconductor.org/packages/biobtreeR/ |
Citation
From within R, enter citation("biobtreeR"):
Tamer Gur. biobtreeR: Using biobtree tool from R. doi:10.18129/B9.bioc.biobtreeR, R package version 1.24.0, https://bioconductor.org/packages/biobtreeR.
Generated from the package metadata; it may differ from the package's own citation.
Download
Follow the installation instructions to use this package in your R session.
| Source package | biobtreeR_1.24.0.tar.gz |
| Windows binary (x86_64) | biobtreeR_1.24.0.zip |
| macOS binary (arm64) | biobtreeR_1.24.0.tgz |
| macOS binary (x86_64) | biobtreeR_1.24.0.tgz |