biobroom
Turn Bioconductor objects into tidy data frames
Bioconductor version: 3.23 · Package version: 1.43.0
This package contains methods for converting standard objects constructed by bioinformatics packages, especially those in Bioconductor, and converting them to tidy data. It thus serves as a complement to the broom package, and follows the same the tidy, augment, glance division of tidying methods. Tidying data makes it easy to recombine, reshape and visualize bioinformatics analyses.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("biobroom")Details
| Maintainer | John D. Storey <jstorey@princeton.edu> and Andrew J. Bass <ajbass@emory.edu> |
| Author | Andrew J. Bass, David G. Robinson, Steve Lianoglou, Emily Nelson, John D. Storey, with contributions from Laurent Gatto |
| License | LGPL |
| URL | https://github.com/StoreyLab/biobroom |
| Bug Reports | https://github.com/StoreyLab/biobroom/issues |
| Status | Deprecated |
| Source branch | RELEASE_3_23 |
| Build report | Bioconductor build system, r-universe |
| biocViews | DataImport, DifferentialExpression, GeneExpression, MultipleComparison, Proteomics, Regression, Software |
| Package Short Url | https://bioconductor.org/packages/biobroom/ |
Citation
From within R, enter citation("biobroom"):
Andrew J. Bass, David G. Robinson, Steve Lianoglou, Emily Nelson, John D. Storey, with contributions from Laurent Gatto. biobroom: Turn Bioconductor objects into tidy data frames. doi:10.18129/B9.bioc.biobroom, R package version 1.43.0, https://bioconductor.org/packages/biobroom.
Generated from the package metadata; it may differ from the package's own citation.
Download
Follow the installation instructions to use this package in your R session.
| Source package | biobroom_1.43.0.tar.gz |
| Windows binary (x86_64) | biobroom_1.43.0.zip |
| macOS binary (arm64) | biobroom_1.43.0.tgz |
| macOS binary (x86_64) | biobroom_1.43.0.tgz |