antiProfiles

This is the released version of antiProfiles; for the devel version, see antiProfiles.

All versions

3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2, 3.1, 3.0, 2.14, 2.13, 2.12

Implementation of gene expression anti-profiles

Bioconductor version: Release (3.23)

Implements gene expression anti-profiles as described in Corrada Bravo et al., BMC Bioinformatics 2012, 13:272 doi:10.1186/1471-2105-13-272.

Author: Hector Corrada Bravo, Rafael A. Irizarry and Jeffrey T. Leek

Maintainer: Hector Corrada Bravo <hcorrada at gmail.com>

Citation (from within R, enter citation("antiProfiles")):

Hector Corrada Bravo, Rafael A. Irizarry and Jeffrey T. Leek. antiProfiles: Implementation of gene expression anti-profiles. doi:10.18129/B9.bioc.antiProfiles, R package version 1.52.0, https://bioconductor.org/packages/antiProfiles.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("antiProfiles")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("antiProfiles")

Introduction to antiProfiles	PDF	R Script
Reference Manual	PDF
NEWS	Text

Need some help? Ask on the Bioconductor Support site!

Details

biocViews	Classification, GeneExpression, Software
Version	1.52.0
In Bioconductor since	BioC 2.12 (R-3.0) (13.5 years)
License	Artistic-2.0
Depends	R (>= 3.0), matrixStats (>= 0.50.0), methods (>= 2.14), locfit (>= 1.5)
Imports
System Requirements
URL	https://github.com/HCBravoLab/antiProfiles

Suggests	antiProfilesData, RColorBrewer
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report	Build Report, r-universe

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	antiProfiles_1.52.0.tar.gz
Windows Binary (x86_64)	antiProfiles_1.52.0.zip
macOS Binary (big-sur-x86_64)	antiProfiles_1.52.0.tgz
macOS Binary (sonoma-arm64)	antiProfiles_1.52.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/antiProfiles
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/antiProfiles
Package Short Url	https://bioconductor.org/packages/antiProfiles/
Package Downloads Report	Download Stats