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STATegRa

Classes and methods for multi-omics data integration


Bioconductor version: Release (3.18)

Classes and tools for multi-omics data integration.

Author: STATegra Consortia

Maintainer: David Gomez-Cabrero <david.gomezcabrero at ki.se>, NĂºria Planell <nuria.planell.picola at navarra.es>

Citation (from within R, enter citation("STATegRa")):

Installation

To install this package, start R (version "4.3") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("STATegRa")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("STATegRa")
STATegRa User's Guide HTML R Script
Reference Manual PDF
NEWS Text

Details

biocViews Clustering, DimensionReduction, PrincipalComponent, Software, StatisticalMethod
Version 1.38.0
In Bioconductor since BioC 3.0 (R-3.1) (9.5 years)
License GPL-2
Depends R (>= 2.10)
Imports Biobase, gridExtra, ggplot2, methods, stats, grid, MASS, calibrate, gplots, edgeR, limma, foreach, affy
System Requirements
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Suggests RUnit, BiocGenerics, knitr (>= 1.6), rmarkdown, BiocStyle(>= 1.3), roxygen2, doSNOW
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package STATegRa_1.38.0.tar.gz
Windows Binary STATegRa_1.38.0.zip
macOS Binary (x86_64) STATegRa_1.38.0.tgz
macOS Binary (arm64) STATegRa_1.38.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/STATegRa
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/STATegRa
Bioc Package Browser https://code.bioconductor.org/browse/STATegRa/
Package Short Url https://bioconductor.org/packages/STATegRa/
Package Downloads Report Download Stats