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This package is deprecated. It will probably be removed from Bioconductor. Please refer to the package end-of-life guidelines for more information.

Add-on of the SQUAD Software

Bioconductor version: Release (3.19)

This package SQUADD is a SQUAD add-on. It permits to generate SQUAD simulation matrix, prediction Heat-Map and Correlation Circle from PCA analysis.

Author: Martial Sankar, supervised by Christian Hardtke and Ioannis Xenarios

Maintainer: Martial Sankar <martial.sankar at>

Citation (from within R, enter citation("SQUADD")):


To install this package, start R (version "4.4") and enter:

if (!require("BiocManager", quietly = TRUE))


For older versions of R, please refer to the appropriate Bioconductor release.


Reference Manual PDF


biocViews GraphAndNetwork, Network, Software, Visualization
Version 1.54.0
In Bioconductor since BioC 2.7 (R-2.12) (13.5 years)
License GPL (>=2)
Depends R (>= 2.11.0)
Imports graphics, grDevices, methods, RColorBrewer, stats, utils
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Follow Installation instructions to use this package in your R session.

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macOS Binary (x86_64) SQUADD_1.54.0.tgz
macOS Binary (arm64) SQUADD_1.54.0.tgz
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