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Rtreemix

Rtreemix: Mutagenetic trees mixture models.


Bioconductor version: Release (3.18)

Rtreemix is a package that offers an environment for estimating the mutagenetic trees mixture models from cross-sectional data and using them for various predictions. It includes functions for fitting the trees mixture models, likelihood computations, model comparisons, waiting time estimations, stability analysis, etc.

Author: Jasmina Bogojeska

Maintainer: Jasmina Bogojeska <jasmina.bogojeska at gmail.com>

Citation (from within R, enter citation("Rtreemix")):

Installation

To install this package, start R (version "4.3") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("Rtreemix")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("Rtreemix")
Rtreemix PDF R Script
Reference Manual PDF

Details

biocViews Software, StatisticalMethod
Version 1.64.0
In Bioconductor since BioC 2.2 (R-2.7) (16 years)
License LGPL
Depends R (>= 2.5.0)
Imports methods, graph, Biobase, Hmisc
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package Rtreemix_1.64.0.tar.gz
Windows Binary Rtreemix_1.64.0.zip
macOS Binary (x86_64) Rtreemix_1.64.0.tgz
macOS Binary (arm64) Rtreemix_1.64.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/Rtreemix
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/Rtreemix
Bioc Package Browser https://code.bioconductor.org/browse/Rtreemix/
Package Short Url https://bioconductor.org/packages/Rtreemix/
Package Downloads Report Download Stats