RandomWalkRestartMH

DOI: 10.18129/B9.bioc.RandomWalkRestartMH    

Random walk with restart on multiplex and heterogeneous Networks

Bioconductor version: Release (3.7)

This package performs Random Walk with Restart on multiplex and heterogeneous networks. It is described in the following article: "Random Walk With Restart On Multiplex And Heterogeneous Biological Networks". https://www.biorxiv.org/content/early/2017/08/30/134734 .

Author: Alberto Valdeolivas Urbelz <alvaldeolivas at gmail.com>

Maintainer: Alberto Valdeolivas Urbelz <alvaldeolivas at gmail.com>

Citation (from within R, enter citation("RandomWalkRestartMH")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("RandomWalkRestartMH")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("RandomWalkRestartMH")

 

PDF R Script Random Walk with Restart on Multiplex and Heterogeneous Networks
PDF   Reference Manual

Details

biocViews BioCarta, BiomedicalInformatics, GenePrediction, GraphAndNetwork, KEGG, MathematicalBiology, Network, NetworkInference, Pathways, Reactome, Software, SomaticMutation, SystemsBiology
Version 1.0.0
License GPL (>= 2)
Depends R (>= 3.5.0)
Imports igraph, Matrix, dnet, methods
LinkingTo
Suggests BiocStyle, testthat
SystemRequirements
Enhances
URL https://www.biorxiv.org/content/early/2017/08/30/134734
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package RandomWalkRestartMH_1.0.0.tar.gz
Windows Binary RandomWalkRestartMH_1.0.0.zip
Mac OS X 10.11 (El Capitan) RandomWalkRestartMH_1.0.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/RandomWalkRestartMH
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/RandomWalkRestartMH
Package Short Url http://bioconductor.org/packages/RandomWalkRestartMH/
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