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Multi-Omics Simulation (MOSim)

Bioconductor version: Release (3.19)

MOSim package simulates multi-omic experiments that mimic regulatory mechanisms within the cell, allowing flexible experimental design including time course and multiple groups.

Author: Carolina Monzó [aut], Carlos Martínez [aut], Sonia Tarazona [cre, aut]

Maintainer: Sonia Tarazona <sotacam at>

Citation (from within R, enter citation("MOSim")):


To install this package, start R (version "4.4") and enter:

if (!require("BiocManager", quietly = TRUE))


For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:

MOSim PDF R Script
Wiki of how to use scMOSim HTML R Script
Reference Manual PDF


biocViews ExperimentalDesign, RNASeq, Software, TimeCourse
Version 2.0.0
In Bioconductor since BioC 3.10 (R-3.6) (4.5 years)
License GPL-3
Depends R (>= 4.2.0)
Imports HiddenMarkov, zoo, IRanges, S4Vectors, dplyr, ggplot2, lazyeval, matrixStats, methods, rlang, stringi, stringr, scran, Seurat, Signac, edgeR, Rcpp
System Requirements
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Suggests testthat, knitr, rmarkdown, codetools, BiocStyle, stats, utils, purrr, scales, tibble, tidyr, Biobase, scater, SingleCellExperiment, decor, markdown, Rsamtools, igraph, leiden, bluster
Linking To cpp11, Rcpp
Depends On Me
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Suggests Me
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package MOSim_2.0.0.tar.gz
Windows Binary
macOS Binary (x86_64) MOSim_2.0.0.tgz
macOS Binary (arm64) MOSim_2.0.0.tgz
Source Repository git clone
Source Repository (Developer Access) git clone
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