MOSim
Multi-Omics Simulation (MOSim)
Bioconductor version: 3.23 · Package version: 2.8.0
Other Bioconductor versions
devel is the development version; release is the current stable one.
3.24 (devel), 3.23 (release)
MOSim package simulates multi-omic experiments that mimic regulatory mechanisms within the cell, allowing flexible experimental design including time course and multiple groups.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("MOSim")Details
| Maintainer | Sonia Tarazona <sotacam@gmail.com> |
| Author | Carolina Monzó [aut], Carlos Martínez [aut], Sonia Tarazona [cre, aut] |
| License | GPL-3 |
| URL | https://github.com/ConesaLab/MOSim |
| Bug Reports | https://github.com/ConesaLab/MOSim/issues |
| Source branch | RELEASE_3_23 |
| Build report | Bioconductor build system, r-universe |
| biocViews | ExperimentalDesign, RNASeq, Software, TimeCourse |
| Package Short Url | https://bioconductor.org/packages/MOSim/ |
Citation
From within R, enter citation("MOSim"):
Carolina Monzó, Carlos Martínez, Sonia Tarazona. MOSim: Multi-Omics Simulation (MOSim). doi:10.18129/B9.bioc.MOSim, R package version 2.8.0, https://bioconductor.org/packages/MOSim.
Generated from the package metadata; it may differ from the package's own citation.
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | MOSim_2.8.0.tar.gz |
| Windows binary (x86_64) | MOSim_2.8.0.zip |
| macOS binary (arm64) | MOSim_2.8.0.tgz |
| macOS binary (x86_64) | MOSim_2.8.0.tgz |
Dependencies
Depends: R (>= 4.2.0)
Imports: HiddenMarkov, zoo, IRanges, S4Vectors, dplyr, ggplot2, lazyeval, matrixStats, methods, rlang, stringi, stringr, scran, Seurat, Signac, edgeR, Rcpp
Suggests: testthat, knitr, rmarkdown, codetools, BiocStyle, stats, utils, purrr, scales, tibble, tidyr, Biobase, scater, SingleCellExperiment, decor, markdown, Rsamtools, igraph, leiden, bluster