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DEWSeq

This is the released version of DEWSeq; for the devel version, see DEWSeq.

All versions

3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10

Differential Expressed Windows Based on Negative Binomial Distribution

DOI: 10.18129/B9.bioc.DEWSeq

Bioconductor version: Release (3.23)

DEWSeq is a sliding window approach for the analysis of differentially enriched binding regions eCLIP or iCLIP next generation sequencing data.

Author: Sudeep Sahadevan [aut], Thomas Schwarzl [aut], bioinformatics team Hentze [aut, cre]

Maintainer: bioinformatics team Hentze <biohentze at embl.de>

Citation (from within R, enter citation("DEWSeq")):

Sudeep Sahadevan, Thomas Schwarzl, bioinformatics team Hentze. DEWSeq: Differential Expressed Windows Based on Negative Binomial Distribution. doi:10.18129/B9.bioc.DEWSeq, R package version 1.26.0, https://bioconductor.org/packages/DEWSeq.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("DEWSeq")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("DEWSeq")

Details

Package Archives

Follow Installation instructions to use this package in your R session.