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Shiny Application for Interactive CRISPR Screen Visualization, Exploration, Comparison, and Filtering

Bioconductor version: Release (3.19)

A Shiny application for visualization, exploration, comparison, and filtering of CRISPR screens analyzed with MAGeCK RRA or MLE. Features include interactive plots with on-click labeling, full customization of plot aesthetics, data upload and/or download, and much more. Quickly and easily explore your CRISPR screen results and generate publication-quality figures in seconds.

Author: Jared Andrews [aut, cre] , Jacob Steele [ctb]

Maintainer: Jared Andrews <jared.andrews07 at>

Citation (from within R, enter citation("CRISPRball")):


To install this package, start R (version "4.4") and enter:

if (!require("BiocManager", quietly = TRUE))


For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:

CRISPRball Quick Start HTML R Script
Reference Manual PDF


biocViews CRISPR, GUI, QualityControl, ShinyApps, Software, Visualization
Version 1.0.0
In Bioconductor since BioC 3.19 (R-4.4) (< 6 months)
License MIT + file LICENSE
Depends R (>= 4.4.0), shinyBS
Imports DT, shiny, grid, ComplexHeatmap, InteractiveComplexHeatmap, graphics, stats, ggplot2, plotly, shinyWidgets, shinycssloaders, shinyjqui, dittoSeq, matrixStats, colourpicker, shinyjs, MAGeCKFlute, circlize, PCAtools, utils, grDevices, htmlwidgets, methods
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Suggests BiocStyle, msigdbr, depmap, pool, RSQLite, mygene, testthat (>= 3.0.0), knitr, rmarkdown
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Follow Installation instructions to use this package in your R session.

Source Package CRISPRball_1.0.0.tar.gz
Windows Binary
macOS Binary (x86_64) CRISPRball_1.0.0.tgz
macOS Binary (arm64) CRISPRball_1.0.0.tgz
Source Repository git clone
Source Repository (Developer Access) git clone
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