ASGSCA
Association Studies for multiple SNPs and multiple traits using Generalized Structured Equation Models
Bioconductor version: 3.23 · Package version: 1.46.0
Other Bioconductor versions
devel is the development version; release is the current stable one.
3.24 (devel), 3.23 (release)
The package provides tools to model and test the association between multiple genotypes and multiple traits, taking into account the prior biological knowledge. Genes, and clinical pathways are incorporated in the model as latent variables. The method is based on Generalized Structured Component Analysis (GSCA).
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("ASGSCA")Details
| Maintainer | Hela Romdhani <hela.romdhani@mcgill.ca> |
| Author | Hela Romdhani, Stepan Grinek , Heungsun Hwang and Aurelie Labbe. |
| License | GPL-3 |
| Source branch | RELEASE_3_23 |
| Build report | Bioconductor build system, r-universe |
| biocViews | Software, StructuralEquationModels |
| Package Short Url | https://bioconductor.org/packages/ASGSCA/ |
Citation
From within R, enter citation("ASGSCA"):
Hela Romdhani, Stepan Grinek, Heungsun Hwang and Aurelie Labbe. ASGSCA: Association Studies for multiple SNPs and multiple traits using Generalized Structured Equation Models. doi:10.18129/B9.bioc.ASGSCA, R package version 1.46.0, https://bioconductor.org/packages/ASGSCA.
Generated from the package metadata; it may differ from the package's own citation.
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | ASGSCA_1.46.0.tar.gz |
| Windows binary (x86_64) | ASGSCA_1.46.0.zip |
| macOS binary (arm64) | ASGSCA_1.46.0.tgz |
| macOS binary (x86_64) | ASGSCA_1.46.0.tgz |