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nullrangesData

This is the released version of nullrangesData; for the devel version, see nullrangesData.

All Bioconductor versions of nullrangesData

3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14

ExperimentHub datasets for the nullranges package

Bioconductor version: 3.23 · Package version: 1.18.0

Provides datasets for the nullranges package vignette, in particular example datasets for DNase hypersensitivity sites (DHS), CTCF binding sites, and CTCF genomic interactions. These are used to demonstrate generation of null hypothesis feature sets, either through block bootstrapping or matching, in the nullranges vignette. For more details, see the data object man pages, and the R scripts for object construction provided within the package.

Author: Michael Love [aut, cre] ORCID iD ORCID: 0000-0001-8401-0545 , Wancen Mu [aut] ORCID iD ORCID: 0000-0002-5061-7581 , Eric Davis [aut] ORCID iD ORCID: 0000-0003-4051-3217 , Mikhail Dozmorov [aut]

Maintainer: Michael Love <michaelisaiahlove at gmail.com>

DOI: 10.18129/B9.bioc.nullrangesData

Citation

From within R, enter citation("nullrangesData"):

Michael Love, Wancen Mu, Eric Davis, Mikhail Dozmorov. nullrangesData: ExperimentHub datasets for the nullranges package. doi:10.18129/B9.bioc.nullrangesData, R package version 1.18.0, https://bioconductor.org/packages/nullrangesData.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("nullrangesData")

For older versions of R, please refer to the appropriate Bioconductor release.

Details

Version1.18.0
LicenseGPL-3
Last updated2026-05-05
In Bioconductor sinceBioC 3.14 (R-4.1) (4 years)
Downloads rank261 of 434
Source branchRELEASE_3_23
Build report Bioconductor build system, r-universe
biocViewsChIPSeqData, ENCODE, ExperimentData, ExperimentHub, Homo_sapiens_Data, SequencingData
Package Short Url https://bioconductor.org/packages/nullrangesData/

Documentation

Reference ManualPDF

Download

Follow the installation instructions to use this package in your R session.

Source packagenullrangesData_1.18.0.tar.gz
Source Repositorygit clone https://git.bioconductor.org/packages/nullrangesData
Source Repository (Developer Access)git clone git@git.bioconductor.org:packages/nullrangesData
Package Downloads ReportDownload Stats
Dependencies

Depends: R (>= 4.1.0), ExperimentHub, GenomicRanges, InteractionSet

Imports: utils

Suggests: knitr, rmarkdown

Reverse dependencies

Suggests Me (2): iSEEhub, nullranges