lmdme
This is the released version of lmdme; for the devel version, see lmdme.
All Bioconductor versions of lmdme
3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2, 3.1, 3.0, 2.14, 2.13, 2.12, 2.11
Linear Model decomposition for Designed Multivariate Experiments
Bioconductor version: 3.23 · Package version: 1.54.0
linear ANOVA decomposition of Multivariate Designed Experiments implementation based on limma lmFit. Features: i)Flexible formula type interface, ii) Fast limma based implementation, iii) p-values for each estimated coefficient levels in each factor, iv) F values for factor effects and v) plotting functions for PCA and PLS.
Author: Cristobal Fresno and Elmer A. Fernandez
Maintainer: Cristobal Fresno <cfresno at bdmg.com.ar>
Citation
From within R, enter citation("lmdme"):
Cristobal Fresno and Elmer A. Fernandez. lmdme: Linear Model decomposition for Designed Multivariate Experiments. doi:10.18129/B9.bioc.lmdme, R package version 1.54.0, https://bioconductor.org/packages/lmdme.
Generated from the package metadata; it may differ from the package's own citation.
Installation
To install this package, start R (version "4.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("lmdme")For older versions of R, please refer to the appropriate Bioconductor release.
Details
| Version | 1.54.0 |
| License | GPL (>=2) |
| URL | http://www.bdmg.com.ar/?page_id=38 |
| Last updated | 2026-04-28 |
| In Bioconductor since | BioC 2.11 (R-2.15) (14 years) |
| Downloads rank | 1134 of 2,418 |
| Source branch | RELEASE_3_23 |
| Build report | Bioconductor build system, r-universe |
| biocViews | Cancer, DifferentialExpression, ExperimentData, Microarray, OneChannel, Software, TwoChannel, Visualization |
| Package Short Url | https://bioconductor.org/packages/lmdme/ |
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("lmdme")| lmdme: linear model framework for PCA/PLS analysis of ANOVA decomposition on Designed Multivariate Experiments in R | R Script | |
| Reference Manual | ||
| NEWS | Text |
Download
Follow the installation instructions to use this package in your R session.
| Source package | lmdme_1.54.0.tar.gz |
| Windows binary (x86_64) | lmdme_1.54.0.zip |
| macOS binary (arm64) | lmdme_1.54.0.tgz |
| macOS binary (x86_64) | lmdme_1.54.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/lmdme |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/lmdme |
| Package Downloads Report | Download Stats |
Dependencies
Depends: R (>= 2.14.1), pls, stemHypoxia
Imports: stats, methods, limma
Enhances: parallel