healthyFlowData
This is the released version of healthyFlowData; for the devel version, see healthyFlowData.
Healthy dataset used by the flowMatch package
Bioconductor version: Release (3.23)
A healthy dataset with 20 flow cytometry samples used by the flowMatch package.
Author: Ariful Azad
Maintainer: Ariful Azad <aazad at purdue.edu>
citation("healthyFlowData")):
Huber W, Carey VJ, Gentleman R, Anders S, Carlson M, Carvalho BS, Bravo HC, Davis S, Gatto L, Girke T, Gottardo R, Hahne F, Hansen KD, Irizarry RA, Lawrence M, Love MI, MacDonald J, Obenchain V, Oleś AK, Pagès H, Reyes A, Shannon P, Smyth GK, Tenenbaum D, Waldron L, Morgan M (2015). "Orchestrating high-throughput genomic analysis with Bioconductor." Nature Methods, 12(2), 115–121. doi:10.1038/nmeth.3252.
Gentleman RC, Carey VJ, Bates DM, Bolstad B, Dettling M, Dudoit S, Ellis B, Gautier L, Ge Y, Gentry J, Hornik K, Hothorn T, Huber W, Iacus S, Irizarry R, Leisch F, Li C, Maechler M, Rossini AJ, Sawitzki G, Smith C, Smyth G, Tierney L, Yang JYH, Zhang J (2004). "Bioconductor: open software development for computational biology and bioinformatics." Genome Biology, 5(10), R80. doi:10.1186/gb-2004-5-10-r80.
Installation
To install this package, start R (version "4.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("healthyFlowData")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("healthyFlowData")| healthyFlowData: A healthy dataset with 20 flow cytometry samples used by the flowMatch package | R Script | |
| Reference Manual |
Details
| biocViews | ExperimentData, FlowCytometryData |
| Version | 1.50.0 |
| License | Artistic-2.0 |
| Depends | R (>= 2.15.0), flowCore |
| Imports | methods |
| System Requirements | |
| URL |
See More
| Suggests | |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | flowMatch |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | healthyFlowData_1.50.0.tar.gz |
| Windows Binary (x86_64) | |
| macOS Binary (big-sur-x86_64) | |
| macOS Binary (sonoma-arm64) | |
| Source Repository | git clone https://git.bioconductor.org/packages/healthyFlowData |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/healthyFlowData |
| Package Short Url | https://bioconductor.org/packages/healthyFlowData/ |
| Package Downloads Report | Download Stats |