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mcsurvdata

This is the development version of mcsurvdata; for the stable release version, see mcsurvdata.

Meta cohort survival data


Bioconductor version: Development (3.20)

This package stores two merged expressionSet objects that contain the gene expression profile and clinical information of -a- six breast cancer cohorts and -b- four colorectal cancer cohorts. Breast cancer data are employed in the vignette of the hrunbiased package for survival analysis of gene signatures.

Author: Adria Caballe Mestres [aut, cre], Antoni Berenguer Llergo [aut], Camille Stephan-Otto Attolini [aut]

Maintainer: Adria Caballe Mestres <adria.caballe at irbbarcelona.org>

Citation (from within R, enter citation("mcsurvdata")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("mcsurvdata")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("mcsurvdata")
analysis vignette HTML R Script
Reference Manual PDF
NEWS Text

Details

biocViews ExperimentData, GEO, Homo_sapiens_Data, MicroarrayData
Version 1.23.0
License GPL (>=2)
Depends R (>= 3.5), ExperimentHub
Imports AnnotationHub, Biobase
System Requirements
URL https://github.com/adricaba/mcsurvdata
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package mcsurvdata_1.23.0.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/mcsurvdata
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/mcsurvdata
Package Short Url https://bioconductor.org/packages/mcsurvdata/
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