VariantToolsData
This is the development version of VariantToolsData; for the stable release version, see VariantToolsData.
All Bioconductor versions of VariantToolsData
3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5
Data for the VariantTools tutorial
Bioconductor version: 3.24 · Package version: 1.37.0
Data from the sequencing of a 50/50 mixture of HapMap trio samples NA12878 (CEU) and NA19240 (YRI), subset to the TP53 region.
Author: Michael Lawrence
Maintainer: Michael Lawrence <michafla at gene.com>
Citation
From within R, enter citation("VariantToolsData"):
Michael Lawrence. VariantToolsData: Data for the VariantTools tutorial. doi:10.18129/B9.bioc.VariantToolsData, R package version 1.37.0, https://bioconductor.org/packages/VariantToolsData.
Generated from the package metadata; it may differ from the package's own citation.
Installation
To install this package, start R (version "4.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")
BiocManager::install("VariantToolsData")For older versions of R, please refer to the appropriate Bioconductor release.
Details
| Version | 1.37.0 |
| License | Artistic-2.0 |
| Last updated | 2026-04-30 |
| In Bioconductor since | BioC 3.5 (R-3.4) (9 years) |
| Downloads rank | 282 of 433 |
| Source branch | devel |
| Build report | Bioconductor build system, r-universe |
| biocViews | ExperimentData, HapMap, SNPData, SequencingData |
| Package Short Url | https://bioconductor.org/packages/VariantToolsData/ |
Documentation
| Reference Manual |
Download
Follow the installation instructions to use this package in your R session.
| Source package | VariantToolsData_1.37.0.tar.gz |
| Source Repository | git clone https://git.bioconductor.org/packages/VariantToolsData |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/VariantToolsData |
| Package Downloads Report | Download Stats |
Dependencies
Depends: R (>= 3.5.0), VariantAnnotation (>= 1.7.35)
Imports: BiocGenerics, GenomicRanges
Suggests: VariantTools (>= 1.3.4), gmapR (>= 1.3.3), BiocStyle